Browsing NIBIO Brage by Author "Lysøe, Erik"
Now showing items 1-11 of 11
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Bioinformatic characterisation of the effector repertoire of the strawberry pathogen Phytophthora cactorum
Armitage, Andrew D.; Lysøe, Erik; Nellist, Charlotte F.; Lewis, Laura A.; Cano, Liliana M.; Harrison, Richard J.; Brurberg, May Bente (Journal article; Peer reviewed, 2018-10-02)The oomycete pathogen Phytophthora cactorum causes crown rot, a major disease of cultivated strawberry. We report the draft genome of P. cactorum isolate 10300, isolated from symptomatic Fragaria x ananassa tissue. Our ... -
A chromosome-level genome sequence assembly of the red raspberry (Rubus idaeus L.)
Davik, Jahn; Røen, Dag; Lysøe, Erik; Buti, Matteo; Rossmann, Simeon; Alsheikh, Muath K; Aiden, Erez Lieberman; Dudchenko, Olga; Sargent, Daniel James (Peer reviewed; Journal article, 2022-03-16)Rubus idaeus L. (red raspberry), is a perennial woody plant species of the Rosaceae family that is widely cultivated in the temperate regions of world and is thus an economically important soft fruit species. It is prized ... -
Comparative Transcriptome Analysis Reveals Novel Candidate Resistance Genes Involved in Defence against Phytophthora cactorum in Strawberry
Gogoi, Anupam; Lysøe, Erik; Eikemo, Håvard; Stensvand, Arne; Davik, Jahn; Brurberg, May Bente (Peer reviewed; Journal article, 2023-06-29)Crown rot, caused by Phytophthora cactorum, is a devastating disease of strawberry. While most commercial octoploid strawberry cultivars (Fragaria × ananassa Duch) are generally susceptible, the diploid species Fragaria ... -
DNA Metabarcoding Reveals Broad Presence of Plant Pathogenic Oomycetes in Soil From Internationally Traded Plants
Rossmann, Simeon; Lysøe, Erik; Skogen, Monica; Talgø, Venche; Brurberg, May Bente (Peer reviewed; Journal article, 2021-03-25)Plants with roots and soil clumps transported over long distances in plant trading can harbor plant pathogenic oomycetes, facilitating disease outbreaks that threaten ecosystems, biodiversity, and food security. Tools to ... -
Fusaoctaxin A, an Example of a Two-Step Mechanism for Non-Ribosomal Peptide Assembly and Maturation in Fungi
Westphal, Klaus Ringsborg; Nielsen, Katrine Amalie Hamborg; Wollenberg, Rasmus Dam; Møllehøj, Mathias Bonde; Bachleitner, Simone; Studt, Lena; Lysøe, Erik; Giese, Henriette; Wimmer, Reinhard; Sørensen, Jens Laurids; Sondergaard, Teis Esben (Journal article; Peer reviewed, 2019-05-16)Fungal non-ribosomal peptide synthetase (NRPS) clusters are spread across the chromosomes, where several modifying enzyme-encoding genes typically flank one NRPS. However, a recent study showed that the octapeptide fusaoctaxin ... -
Genome analysis of Phytophthora cactorum strains associated with crown- and leather-rot in strawberry
Gogoi, Anupam; Rossmann, Simeon Lim; Lysøe, Erik; Stensvand, Arne; Brurberg, May Bente (Peer reviewed; Journal article, 2023-07-03)Phytophthora cactorum has two distinct pathotypes that cause crown rot and leather rot in strawberry (Fragaria × ananassa). Strains of the crown rot pathotype can infect both the rhizome (crown) and fruit tissues, while ... -
Genomic signatures and insights into host niche adaptation of the entomopathogenic fungus Metarhizium humberi
Iwanicki, Natasha Sant'Anna; Botelho, Ana Beatriz Riguetti Zanardo; Ingeborg, Klingen; Júnior, Italo Delalibera; Simeon, Rossmann; Lysøe, Erik (Peer reviewed; Journal article, 2021-02)The genus Metarhizium is composed of species used in biological control programs of agricultural pests worldwide. This genus includes common fungal pathogen of many insects and mites and endophytes that can increase plant ... -
Identification and distribution of gene clusters required for synthesis of sphingolipid metabolism inhibitors in diverse species of the filamentous fungus Fusarium
Kim, Hye-Seon; Lohmar, Jessica M.; Busman, Mark; Brown, Daren W.; Naumann, Todd A.; Divon, Hege Hvattum; Lysøe, Erik; Uhlig, Silvio; Proctor, Robert H. (Peer reviewed; Journal article, 2020-07-23)Background Sphingolipids are structural components and signaling molecules in eukaryotic membranes, and many organisms produce compounds that inhibit sphingolipid metabolism. Some of the inhibitors are structurally similar ... -
Microdochium majus and other fungal pathogens associated with reduced gluten quality in wheat grain
Aamot, Heidi Udnes; Lysøe, Erik; Koga, Shiori; Nielsen, Katherine Ann Gredvig; Böcker, Ulrike; Brodal, Guro; Dill-Macky, Ruth; Uhlen, Anne Kjersti; Hofgaard, Ingerd Skow (Peer reviewed; Journal article, 2020-06-02)The bread-making quality of wheat depends on the viscoelastic properties of the dough in which gluten proteins play an important role. The quality of gluten proteins is influenced by the genetics of the different wheat ... -
Nye molekylære verktøy for bedre plantehelse
Brurberg, May Bente; Rossmann, Simeon Lim; Lysøe, Erik; Skogen, Monica; Fossdal, Carl Gunnar (Journal article, 2024)Kombinasjonen av raskere, billigere DNA-sekvenseringsteknologier og avanserte analysemetoder har gjort høykapasitetssekvensering til et svært attraktivt verktøy med flere anvendelsesområder innen plantehelse. -
Transcriptome profiling and in silico detection of the antimicrobial peptides of red king crab Paralithodes camtschaticus
Yakovlev, Igor; Lysøe, Erik; Heldal, Inger; Steen, Hege; Hagen, Snorre; Clarke, Jihong Liu (Peer reviewed; Journal article, 2020-07-29)Endogenous antimicrobial peptides (AMPs) are evolutionarily ancient factors of innate immunity, which are produced by all multicellular organisms and play a key role in their protection against infection. Red king crab ...